Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886595.1_cds_XP_016440721.1_36151
CDS Infomation

[gene=LOC107766454] [db_xref=GeneID:107766454] [protein=protein SMAX1-LIKE 3-like] [protein_id=XP_016440721.1] [location=complement(join(19065..20117,20214..20289,21110..22275))] [gbkey=CDS]
Sequence

ATGAGAACAGGAGGCTGCACAATACAACAAGCTCTAACAACTGAAGCAGCAGCTGTTGTA
AAACAAGCTGTGCAACTTGCTAAACGTCGCGGCCATGCCCAAGTAACACCTCTCCATGTA
GCAAACACAATGCTTTCTTCTTCAAATGGTATACTCAAAACAGCTTGTCTTCAATCTCAT
TCTCATCCTCTCCAATGCAAAGCCCTAGAGCTTTGCTTCAACGTCGCGCTCAATCGCCTT
CCTGCATCATCTTCTAGCCCCATGTTATTGGGCCATGGCCATCATCATCAATCTCAATAT
CCTTCCATTTCTAACGCGCTTATTGCTGCCTTCAAGCGAGCCCAAGCCCACCAAAGGCGA
GGATCGATTGAGAATCAACAGCAGCCTCTTTTAGCTGTGAAAATAGAGCTTGAGCAACTT
ATTATTTCTATATTAGATGATCCTAGTGTGAGTAGGGTTATGAGGGAAGCTGGTTTTTCT
AGTCCTCAAGTCAAAAGTAATGTGGAACAAGCTGTTTCTTTAGAGCTTTGCTCTCAAAAT
CCTTCTCCTAATTCAAGTAAAGAAATTAACCAAGTACTAACAAGCAATAAAGTAATCTGT
CCTATTTTTGTTAAAGATGAGGATGTGATGAGTGTAGTGGAAAGTTTAATGAGCAAAAGA
AAGAAAAGTATTGTGATAGTTGGTGAATGTCTTGATAGTTTAGAAGGTGTGATTAAAGGG
GTGATGAATAAAGTTGATAATAGAGATGTTCCTCAAGTTTTAAAAGAAGTTAAGTTCATT
AGTTTACCACTTTTAACTTTTGGTAATATCCAAAGAGAAGAAGTTGAACAAAGAATAGGT
GAGTTGACTTGTCTTGTTAAGAGTTTAGGAGCAAAAGGAGTTGTTTTGTACTTGGGTGAT
CTTAAATGGATTGCTGATTTTAGGGTTAATAGTTGTGGTGGGCAAGGGGGAATTAGCTAC
TATTGTTCTGTGGAGCACATGATTATGGAAATTGGGAGATTGGTATGTAGTTTTGGGGAA
AATGAAAAAATTTGGCTTGTGGGAATTGCAACATTTCAAACTTACATGAGATGCAAAAGT
GGTAACAATTCATTGGAATCTATTTGGGGTCTGCATCCTGTTACAGTTACTGGTGGCAGT
TTGGCCCTCAGTCTTAAACCTGACAGTGAGTCTACGTTGTCAAGTCTACCTTCATGGCTT
AAAGATGAGAGGCAAAGAAATAGTACTCCTAATAATGATCAGAACTGTGTATCGGTCAAA
GAGCTACACAACAAGTGGACTACAACATGCAGTTCTATGCATAAACAGACCAAAAGTTTT
GAAAGAAGTTTGTCCTTTCCTTCTTCAAATGCAAATTTGGACCATAATTTGCCATTTTGG
GCAAAGAGCAAAACATGTGAGACAAGTTTAAGAATCTACATTCCTGACCACAACGACCAA
ACAAGTGCTGCATTATTATCATCTAATCCAAATTCTAACCCTAATTCTGCTTCGAATTCA
AGTGAAGTTGTTATGGAAATGGAGTGTGTTCCAAAGTTGAAGGAGTTCAATTCTGAAAAT
TTGAACATTTTGTCCAATGCATTAGAGGAAATAGTCCCATGGCAAAAGGATATTATTCAA
GAAATTGCTTCCACAATATTGCAATGCAGGTCTGGAATGATTAGAAGAAAAGAAATATCA
CTAAATATTGGTAGTGAAGCAAAAGAAGAAACTTGGTTATTTTTCCAAGGTCCTGATGTT
CAAGCCAAGGAGACAATTGCTAGAGAATTGGCAAAGATTGTGTTTGGATCATATTTTAAT
TTTGTATCAATTGCTTTGAGCAGCTTTAAGGCAGATTCAACAGAAGATTTTAGGAACAAA
AGGTCAAGAAATGAACAAAGTTGGAGCTACATTGACAAATTTGCTCAAGCAATAGTTTCT
TCAAATAATTCTCATTGTGTTTTCTACTTAGAGGATGTTGATCAAGTGGATTATTTTTCT
CAAAGGGGAATCAAGAAAGCTATTGAAAGAGGAATTGTCACAAATTCAAGTGGTGAAGAA
TTGAGTCTAAATGATGCCATTATCATTTTGAGTTATGAGAGTTTTAGTTCTAAATCAAGA
GCTTGTTCTCCTACTGTGAAGCAAAAATCATCTGAAGAAACTACAACAAGCCCTTGTGTT
TCTTTGGATTTGAATATCTCCATTGATTATGATCAAGAAAGAGATGAAGATTTGTCCAAT
ATTGATGATATTGGGCTGCTTCATAGTGTTGACAGATGTATTTTTTTCCAAAATTCAAGA
GCTGTAAAAGAATAG

Peptide Sequence

PEP ID

XP_016440721.1
PEP Infomation

PREDICTED: protein SMAX1-LIKE 3-like [Nicotiana tabacum]
Sequence

MRTGGCTIQQALTTEAAAVVKQAVQLAKRRGHAQVTPLHVANTMLSSSNGILKTACLQSH
SHPLQCKALELCFNVALNRLPASSSSPMLLGHGHHHQSQYPSISNALIAAFKRAQAHQRR
GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSPQVKSNVEQAVSLELCSQN
PSPNSSKEINQVLTSNKVICPIFVKDEDVMSVVESLMSKRKKSIVIVGECLDSLEGVIKG
VMNKVDNRDVPQVLKEVKFISLPLLTFGNIQREEVEQRIGELTCLVKSLGAKGVVLYLGD
LKWIADFRVNSCGGQGGISYYCSVEHMIMEIGRLVCSFGENEKIWLVGIATFQTYMRCKS
GNNSLESIWGLHPVTVTGGSLALSLKPDSESTLSSLPSWLKDERQRNSTPNNDQNCVSVK
ELHNKWTTTCSSMHKQTKSFERSLSFPSSNANLDHNLPFWAKSKTCETSLRIYIPDHNDQ
TSAALLSSNPNSNPNSASNSSEVVMEMECVPKLKEFNSENLNILSNALEEIVPWQKDIIQ
EIASTILQCRSGMIRRKEISLNIGSEAKEETWLFFQGPDVQAKETIARELAKIVFGSYFN
FVSIALSSFKADSTEDFRNKRSRNEQSWSYIDKFAQAIVSSNNSHCVFYLEDVDQVDYFS
QRGIKKAIERGIVTNSSGEELSLNDAIIILSYESFSSKSRACSPTVKQKSSEETTTSPCV
SLDLNISIDYDQERDEDLSNIDDIGLLHSVDRCIFFQNSRAVKE

Transcript Sequence

Gene sequence data has not been registered.